[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 575 items for (author: lu & gj)

EMDB-17870:
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17874:
Structure of the transcription termination factor Rho in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17875:
Structure of the transcription termination factor Rho in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17876:
Structure of Rho pentamer in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17877:
Structure of Rho pentamer in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptg:
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptm:
Structure of the transcription termination factor Rho in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptn:
Structure of the transcription termination factor Rho in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8pto:
Structure of Rho pentamer in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptp:
Structure of Rho pentamer in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-37240:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-37241:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khc:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khd:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-43658:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43659:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43660:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vye:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyf:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyg:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-33347:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-7xog:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

EMDB-33346:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-7xoe:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

EMDB-36111:
Gq bound FZD1 in ligand-free state
Method: single particle / : Lin X, Xu F

EMDB-36112:
Cryo-EM structure of inactive FZD1
Method: single particle / : Lin X, Xu F

EMDB-36258:
FZD6 in inactive state
Method: single particle / : Xu F, Zhang Z

EMDB-36261:
FZD6 Gs complex
Method: single particle / : Xu F, Zhang Z

EMDB-36262:
FZD3 in inactive state
Method: single particle / : Xu F, Zhang Z

EMDB-36266:
FZD3-Gs complex
Method: single particle / : Xu F, Zhang Z

PDB-8j9n:
Gq bound FZD1 in ligand-free state
Method: single particle / : Lin X, Xu F

PDB-8j9o:
Cryo-EM structure of inactive FZD1
Method: single particle / : Lin X, Xu F

PDB-8jh7:
FZD6 in inactive state
Method: single particle / : Xu F, Zhang Z

PDB-8jhb:
FZD6 Gs complex
Method: single particle / : Xu F, Zhang Z

PDB-8jhc:
FZD3 in inactive state
Method: single particle / : Xu F, Zhang Z

PDB-8jhi:
FZD3-Gs complex
Method: single particle / : Xu F, Zhang Z

EMDB-34552:
Structure of dimeric mouse SCMC core complex
Method: single particle / : Chi P, Ou G, Han Z, Li J, Deng D

EMDB-34554:
Structure of mouse SCMC bound with KH domain of FILIA
Method: single particle / : Chi P, Ou G, Han Z, Li J, Deng D

EMDB-34555:
Structure of mouse SCMC bound with full-length FILIA
Method: single particle / : Chi P, Ou G, Han Z, Li L, Deng D

EMDB-34556:
Structure of mouse SCMC core complex
Method: single particle / : Chi P, Ou G, Li J, Han Z, Deng D

PDB-8h93:
Structure of dimeric mouse SCMC core complex
Method: single particle / : Chi P, Ou G, Han Z, Li J, Deng D

PDB-8h94:
Structure of mouse SCMC bound with KH domain of FILIA
Method: single particle / : Chi P, Ou G, Han Z, Li J, Deng D

PDB-8h95:
Structure of mouse SCMC bound with full-length FILIA
Method: single particle / : Chi P, Ou G, Han Z, Li L, Deng D

PDB-8h96:
Structure of mouse SCMC core complex
Method: single particle / : Chi P, Ou G, Li J, Han Z, Deng D

EMDB-42399:
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp and DNA
Method: single particle / : Huang Y, Marcus K, Subramanian S, Gee LC, Gorday K, Ghaffari-Kashani S, Luo X, Zhang L, O'Donnell M, Kuriyan J

EMDB-42402:
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp
Method: single particle / : Huang Y, Marcus K, Subramanian S, Gee LC, Gorday K, Ghaffari-Kashani S, Luo X, Zhang L, O'Donnell M, Kuriyan J

PDB-8unf:
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp and DNA
Method: single particle / : Huang Y, Marcus K, Subramanian S, Gee LC, Gorday K, Ghaffari-Kashani S, Luo X, Zhang L, O'Donnell M, Subramanian S, Kuriyan J

PDB-8unh:
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp
Method: single particle / : Huang Y, Marcus K, Subramanian S, Gee LC, Gorday K, Ghaffari-Kashani S, Luo X, Zhang L, O'Donnell M, Subramanian S, Kuriyan J

EMDB-36399:
T1AM-bound mTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

EMDB-36400:
Ulotaront(SEP-363856)-bound mTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more